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Systems Medicine Conference in Slovenia

Systems Medicine Conference in Slovenia: National Awareness Event,12th CFGBC Symposium and “Systems Medicine” Workshop took place from June 8th-9th 2017 at Hotel Slon, Ljubljana, Slovenia.

CASyM winter school of Systems Medicine

CASyM winter school of Systems Medicine took place between March 29th and April 1st 2017 in Ljubljana, Slovenia and is entitled »The 3rd SysBioMed hands-on tutorial: Systems Medicine Approaches in Personalized Medicine«

ELIXIR-SI launch & 11TH CFGBC Symposium

The event with motto “Data for Life” took place from September 20th - 21st 2016 at Cankarjev dom and the Faculty of Medicine, University of Ljubljana, Slovenia.

2017-03-27
 CASyM 2017 Winter School

PDF Programme

Wednesday, March 29th 2017

  • 13:30 – 14:00: Registration
  • 14:00 – 14:15: Opening ceremony
  • 14:15 – 15:00: EASyM Keynote lecture
    • Charles Auffray, EISBM, France: Making sense of big data in health research through systems medicine and open science
  • 15:00 – 15:45: Lecture
    • Damjana Rozman, University of Ljubljana, Slovenia and Olaf Wolkenhauer, University of Rostock, Germany: An introduction to Systems Medicine-insight from the research and modelling perspective
  • 15:45 – 16:15: Coffee Break
  • 16:15 – 18:45: Tutorial 1
    • Johannes Schuchardt, MicroDiscovery Gmbh: Employing Bioinformatics resources for Systems Medicine
  • 19:00 – 21:00: Get-together dinner

Thursday, March 30th 2017

  • 9:00 – 9: 45: Lecture
    • Anna Norrby-Teglund, Karolinska Institute, Sweden: INFECT-project: a systems medicine approach to advance our understanding of necrotizing soft tissue infection
  • 9:45 – 10:30: Lecture
    • Carole Goble, University of Manchester, UK: FAIR Data and Model Management
  • 10:30 – 10:45: Coffee Break
  • 10:45 – 13:15: Tutorial 2
    • Martin Golebiewski, Olga Krebs and Wolfgang Muller, Heidelberg Institute for Theoretical Studies, Germany: FAIRDOM data management tools hands-on
  • 13:15 – 14:00: Lunch break
  • 14:00 – 14:45: Lecture
    • Aridaman Pandit, University Medical Center Utrecht, the Netherlands: Systems biology for patient stratification and personalized medicine of autoimmune diseases
  • 14:45 – 15:30: Lecture
    • Vita Dolžan, University of Ljubljana, Slovenia: Translation of pharmacogenomics research into clinical practice within the PREPARE study
  • 15:30 – 18:00: Tutorial 3
    • Miha Moškon, Damjana Rozman, Tanja Cvitanović, University of Ljubljana, Slovenia: Tackling liver disease: an object oriented modelling approach
  • 19:00 – 21:00: Dinner - get familiar with Slovenian tastes

Friday, March 31st 2017

  • 9:00 – 9:45: Lecture
    • Christoph Sensen, University of Graz, Austria: CAVEMan, Virtual Organs in Modern Medicine
  • 9:45 – 12:15: Tutorial 4
    • Francis Levi, Pasquale Innominato, Annabelle Ballesta, University of Warwick: Modelling of Personalized cancer chrono-therapeutics
  • 12:15 – 13:00: Lecture
    • Frank Lammert, University of Saarland, Germany: Systems medicine from the clinical perspective
  • 13:00 – 14:00: Lunch break
  • 14:00 – 16:30: Tutorial 5
    • Borut Peterlin, Aleš Maver, University Medical Centre Ljubljana, Slovenia: Clinical next generation sequencing for diagnosis of rare diseases
  • 16:30 – 19:00: Tutorial 6
    • Olaf Wolkenhauer, Markus Wolfien, University of Rostock, Germany: Customized sequencing data analyses with Galaxy and Trapline
  • FREE EVENING - Open air event named Odprta kuhinja at Pogačarjev trg, Ljubljana

Saturday, April 1st 2017

  • 9:00 – 10:30: Tutorial 7
    • Petra Hudler, University of Ljubljana, Slovenia: Predictive functional annotation of genetic variations
  • 10:30 – 12:00 Tutorial 8
    • Brane Leskošek, Jure Dimec, University of Ljubljana, Elixir Slovenia: Use of bioinformatics tools via ELIXIR-SI e-learning platform
  • 12:00 – 12:45 Exam
  • Closing of the meeting
2006 - University of Ljubljana, Faculty of Medicine, Center for Functional Genomics and Bio-chips.